darn villins

BaLa · Post by **BaLa** » Mon Feb 05, 2001 8:31 pm

gotta h8 them villins

edit: oops I wrote "image"

[ 02-05-2001: Message edited by: balakov10 ]

RicRogue · Post by **RicRogue** » Mon Feb 05, 2001 8:34 pm

SeedOfChaos · Post by **SeedOfChaos** » Mon Feb 05, 2001 9:05 pm

I want betahairpins only!!! My last three WU's were damn villins!

RoundEye · Post by **RoundEye** » Mon Feb 05, 2001 9:14 pm

What do y'all mean by "villians" and "beta hairpins". How do I tell what I'm crunching?

BaLa · Post by **BaLa** » Mon Feb 05, 2001 10:12 pm

thanks RicRouge

yeah I hate them too, I got a Betahairpin this time.

Roundeye: there are 3 ways to see it,

1.) Right after you download a new unit it tells you, I will paste it on here next time.
2.) You can get FoldMontior http://user.neosmart.com/hruzaden/folding (I think Den from DSLR Helix made it), you need some perl stuff though instructions are on the page.
3.) Also you can look @ work.dat in your F@H directory.

BaLa · Post by **BaLa** » Mon Feb 05, 2001 10:59 pm

ok finished WU

project:
"project"
xyzfile:
" 392 villin
1 CH3 -7.985377 -4.433594 29.147090 7 2
..."
keyfile:
"parameters ./opls.prm
NOVERSION
ARCHIVE

cutoff 16.0
taper 12.0

..."
Got work, writing checkpoint file
Starting run
Writing local files: project.xyz project.key.
Attempting to write file "project.key"...Successfully wrote file "project.key".
Attempting to write file "project.xyz"...Successfully wrote file "project.xyz".
PROJECT="project", NSTEPS=50000, DT=2.00, DTDUMP=1.00, TEMP=300.00
TINKER: Software Tools for Molecular Design
Version 3.8 October 2000
Copyright (c) Jay William Ponder 1990-2000

that's it

blebs · Post by **blebs** » Tue Feb 06, 2001 3:56 pm

Originally posted by RoundEye:
What do y'all mean by "villians" and "beta hairpins". How do I tell what I'm crunching?

Beta hairpins run very quick compared to Villins. I was crunching hairpins at a rate of 1 frame every 23 seconds.

The villins, on the other hand, take about 75 seconds per frame. sloooooooowwwww! That's why we all hate em.

So if your doing hairpins, 100 frames is easy to see completed in about 30 minutes. villians take about 3.5 hours for 100 frames or 1 unit. At least for me anyway!

[ 02-06-2001: Message edited by: blebs99 ]

Amakuni · Post by **Amakuni** » Wed Feb 07, 2001 11:14 am

Villins are taking me about 5 hours and 30 minutes on my 233 and about 2 hours on my 850. People with AMD Gig machines must really be cranking them out.

ssjDoh · Post by **ssjDoh** » Wed Feb 07, 2001 3:07 pm

Originally posted by Amakuni:
Villins are taking me about 5 hours and 30 minutes on my 233 and about 2 hours on my 850. People with AMD Gig machines must really be cranking them out.

Well sorta....those nasty guys take me about an hour..